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과학탐구 생명과학 실험 실습 탐구

16S rRNA 서열을 이용한 염기서열분석의 기초

rRNA databases

https://www.arb-silva.de/

A comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data.

–> ribosomal RNA sequence data

 

MUSCLE

Tools > Multiple Sequence Alignment > MUSCLE

https://www.ebi.ac.uk/Tools/msa/muscle/

MUSCLE stands for MUltiple Sequence Comparison by Log- Expectation. MUSCLE is claimed to achieve both better average accuracy and better speed than ClustalW2 or T-Coffee, depending on the chosen options.

–> Multiple Sequence Alignment

 

Tools > Pairwise Sequence Alignment > EMBOSS Needle

https://www.ebi.ac.uk/Tools/psa/emboss_needle/

EMBOSS Needle reads two input sequences and writes their optimal global sequence alignment to file.

–> Pairwise Sequence Alignment

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